PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_11118
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 215aa    MW: 24880.5 Da    PI: 9.8592
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_11118genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2353.6e-1191132351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV++  k+ +W A I++      +k+++lg+ g+ e+Aa+++++a+ 
  PEQU_11118  91 LRGVYF--KNMKWQAAIKVE-----KKQIHLGTVGSQEDAARLYDRAAF 132
                 59**98..47*********6.....6********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.7E-490147IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-791134IPR016177DNA-binding domain
PfamPF008479.3E-591133IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-693142IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MGLRYITLTC STAVSHGQSK ETKTNGTMFC QIFMKQALDR QLCLLQALQR RKLIIIFQVS  60
FSGLYLWHCK DIRHRKRYRR KLYEDQEPCI LRGVYFKNMK WQAAIKVEKK QIHLGTVGSQ  120
EDAARLYDRA AFMCGRQPNF ELPEEEKREL SHYNWEEFLA VTRNAINHKK LQRRIGGGRK  180
KGGIQTRGSD VEEPERGTCG SQSVSDDGEV EGFAS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009403605.11e-59PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
TrEMBLM0T4P93e-58M0T4P9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P06510_0018e-58(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-42ERF family protein